Preheat the oven to 350ºF (180ºC). Line a baking sheet with parchment paper.
In a medium bowl mix together the apple sauce, vanilla, cinnamon, maple syrup and vegetable oil until well combined. In another bowl whisk together the oats, oat flour, flaxseeds, whole wheat flour and baking powder.
Add the wet ingredients to the dry and stir until a sticky dough is formed. Add the chocolate chips and give another good stir.
Using a medium cookie scoop, size 2 tablespoons (or heaping tablespoons), drop spoonfuls of cookie dough 2“ (5 cm) apart onto the prepared baking sheet. With wet fingers press and shape the cookies so they are ¼“ (½ cm) thick.
Bake for 15 minutes or until the bottom of the cookies are light brown. Enjoy!